Centennial Story 35: Jason Cope (PhD, 2009)

The first time I visited the SAFS, it was a misty and slightly cold Friday morning in November of 2001. I had flown in to meet with André Punt, a new research professor, about the possibility of becoming a graduate student in his lab. I was finishing up an MS degree at Moss Landing Marine Laboratories in the Monterey Bay area of California, where Novembers were a bit milder and less cloudy than this introduction to Seattle. But hailing from sunny southern California and having spent my undergraduate years at the usually rainless University of California at Berkeley, I always longed for rainy days and happily greeted the gray and the mist.

Jason and wife Marilyn in an abandoned carnival, post-stock assessment work in Australia, 2004.
Jason and wife Marilyn in an abandoned carnival, post-stock assessment work in Australia, 2004.

I entered the new-ish SAFS building that looked like a cannery straight from Steinbeck’s days (making me feel right at home) and walked up the central staircase. The concrete and metal with tall, bright windows was clean, open, and welcoming. My meeting with André was not for another hour, so I headed into room 203, just beyond a large room full of computers (their hum and artificial heat would bathe me for years to come). FSH 203 is a room I became ultra familiar with in time: classes, seminars, workshops, meetings, defenses, and special occasions all used FSH 203, as did my own PhD defense seven years later to the month of this visit. I entered the room and was immediately greeted by Carolina Minte-Vera (PhD, 2004) and introduced to the Quantitative Seminar, a long-running Friday seminar series hosted by SAFS graduate students (of which I become coordinator in the 2004–2005 school year).

What I particularly remember that day was meeting several international SAFS graduate students at the seminar and getting the strong sense that there was something very special about this institution. I then talked with André—at that time a South African-born Australian citizen living in the United States—about the work in his new and expanding laboratory. I would soon thereafter meet André’s first graduate student working on his MS, Gavin Fay (MS, 2004; PhD, 2012) from Sheffield, England. He and I would share an office together until September 2007, when I started working at the National Marine Fisheries Service’s Northwest Fisheries Science Center (NWFSC), a place that remains my professional home. And Gavin remains a close and dear friend.

Throughout my six years at SAFS, I got to know many wonderful and talented people from all around the world. From graduate students to visiting scientists, American and international scientists exchanged ideas, wrote papers together, and supported each other through challenging moments, becoming both colleagues and friends. I was able to witness so many people, whether from the United States or elsewhere, take their education from SAFS and transfer that knowledge to places far from the Seattle campus. And while my office is still based in the beautiful Emerald City, I have had the wonderful opportunity at the NWFSC to teach, work, and build technical capacity in fisheries science on six continents (still working on Antarctica), in addition to hosting visiting scientists and policy makers from numerous foreign institutions. While domestic stock assessment and fisheries management issues are our primary responsibilities at the NWFSC, fisheries science is a global activity and outreach is democratic. I spend a large amount of research effort in this worldwide arena. In my professional endeavors abroad I repeatedly encounter SAFS graduates doing impressive and important work.

Jason missed his own graduation owing to having to attend a Groundfish Management Team meeting for the pacific Fishery Management Council. Here he is emulating his cohort by throwing his cap.
Jason missed his own graduation owing to having to attend a Groundfish Management Team meeting for the pacific Fishery Management Council. Here he is emulating his cohort by throwing his cap.

My view of the long SAFS tradition is that it is intrinsically diverse, transferable, and broadly applicable. It is cross-disciplinary and fundamentally cosmopolitan. The inclusive nature of the student body is a heritage that encourages innovative thoughts, novel actions and broad reach, and is notably one of SAFS’s greatest strengths and important legacies. May the next 100 years continue to bring scientists from all corners of our world, from varied backgrounds and cultures, unified in the profession of asking questions and seeking answers that boundlessly advance and redefine how to do fisheries science while unifying generations to come that perceive no borders.


Centennial Story 38: Jim Meador (PhD, 1988)

As a California native (mum’s the word!), I came to SAFS to study aquatic toxicology in 1983. I had knocked off an MS at San Diego State University and was lucky enough to complete a BS at Humboldt State. Prior to coming to SAFS, I was a marine biologist at the Naval Ocean Systems Center in San Diego and a deep-sea ecologist at the Scripps Institution of Oceanography in La Jolla, where I met my wife (Susan Picquelle) a NOAA statistician (Southwest Fisheries Science Center and Alaska Fisheries Science Center). Susan retired after 31 years to pursue her passion, garden design.

Jim at the Wallace River Hatchery
Jim at the Wallace River Hatchery

I was happy in San Diego and had no plans to pursue another degree, but Gary Stauffer (SAFS alumnus [PhD, 1973] at the Alaska Fisheries Science Center) was persuasive and convinced me to apply to UW.  Over the years, there was considerable movement of fisheries folks up and down the west coast, so we had a welcoming circle of friends after arriving. Originally, I was planning to work with George Brown, but was fortunate to land in Frieda Taub’s lab and plug-in to her ongoing work on ecosystems in a jar (Standardized Aquatic Microcosms). This was cutting-edge research to study ecological processes in perturbed systems under a variety of conditions by evaluating the responses observed for a suite of algal and invertebrate species. Each experiment comprised multiple doses, with replication, generating a massive amount of data. Frieda’s research team consisted of several SAFS faculty members, including Tom Sibley, Loveday Conquest, and Gordie Swartzman, who were also instrumental in my education.  My time in Frieda’s lab was a fantastic learning experience, providing infusions of chemistry, statistics, modeling, toxicology, and of course, fisheries science that solidified the foundation for my career.

Jim in full scuba gear riding a bicycle underwater
“I never miss an opportunity to ride.” Taken in 2014.

After graduating, I didn’t stray far from campus (about 400 m as the fish swims). I started working at the Northwest Fisheries Science Center (NWFSC) in 1989 as an NRC postdoc with Usha Varanasi and was offered a full-time position in 1990. Working at the NWFSC has been a blast, most of the time, where I am an environmental toxicologist studying a variety of contaminants and their effects on critters ranging from worms to whales. Currently, I am trying to figure out the importance of pharmaceuticals and related chemicals in causing adverse effects to physiological function in juvenile Chinook salmon. Somewhat unexpectedly, this recent research has attracted the attention of myriad newspapers, magazines, and radio shows, including a skit by Stephen Colbert (just Google “Sammy the Salmon Colbert”). Needless to say, people get a bit agitated when they hear about fish on drugs. My other area of study concerns the effects of oil on Arctic fish with colleagues in Tromsø, Norway. When I am not slaving away at the computer or the lab, you can find me on a bicycle, taking pictures of cool fish in the Caribbean, or keeping our garden green.

SAFS provided a variety of skills, knowledge, and connections, allowing me to be successful in my chosen field. After seeing how things are done at a number of universities, I can appreciate the world-class education I received at the SAFS. As an affiliate professor in the UW Department of Environmental and Occupational Health Sciences (School of Public Health), I am able to give back to the university and hopefully inspire younger minds to tackle the challenging environmental issues we face.


Centennial Story 37: Kristin Marshall (MS, 2007; Postdoc)

I was an MS student at SAFS from 2003–2007 and returned in 2014–2016 for a post-doc, both in Tim Essington’s lab. It goes without saying that the technical training I got from SAFS was of extremely high quality and prepared me for a career as a fisheries scientist at the Northwest Fisheries Science Center (NWFSC), where I am now. But, there were three intangible gifts SAFS gave me that I wasn’t expecting: entry into an elite club of respected fisheries scientists, an incredible set of colleagues, and life-long friendships.

Friends Kristi Straus, Donna Hauser, and Kristin Marshall, met at SAFS in 2003.
Friends Kristi Straus, Donna Hauser, and Kristin Marshall, met at SAFS in 2003.

After I finished my MS at SAFS, I went to Colorado State for a PhD in Ecology. When I was interviewing for that position in 2008, I was struck by the immediate level of respect with which I was treated because of my MS degree. Not one faculty member that I interviewed with questioned my skills or my ability to take on the funded fellowship I was applying for. It was a given that I could do it because I had been through SAFS. I’ve had similar experiences around the country and around the world—a SAFS graduate degree confers status.

Carey McGilliard, Mary Hunsicker, Jodie Toft, Kristin Marshall, Neala Kendall, and Anne Beaudreau. Colleagues, peer mentors, and friends for 15 years and counting.
Carey McGilliard, Mary Hunsicker, Jodie Toft, Kristin Marshall, Neala Kendall, and Anne Beaudreau. Colleagues, peer mentors, and friends for 15 years and counting.

I returned to Seattle and to fisheries science after my PhD and have discovered many of my school friends from SAFS are now colleagues. I remember Tim saying in one Essington lab meeting how fun it was for him to have his grad school buddies as collaborators. At the time, I had a hard time envisioning that would happen, but a decade later I led a NCEAS working group with three of my Essington labmates (Anne Beaudreau [PhD, 2009], Mary Hunsicker [PhD, 2009], and Jordan Watson [MS, 2007]) and another former SAFS grad student colleague, whom I happen to have married (Eric Ward [PhD, 2006]).  Returning to SAFS as a post-doc, I got to collaborate with a new generation of super sharp and productive Essington lab students (Megsie Siple [PhD, 2017], Christine Stawitz [PhD, 2017], Laura Koehn [PhD, current], Pam Moriarty [PhD, 2018], Kiva Oken [PhD, 2016, QERM], Emma Hodgson [PhD, 2017]). And now, at NWFSC, there are more SAFS alumni than I can count, and more than half of the staff in my program are SAFS grads I overlapped with during my MS and postdoc (e.g., Jason Cope [PhD, 2009], Melissa Haltuch [PhD, 2008], Ian Taylor [PhD, 2008, QERM], Chantel Wetzel [BS, 2007; MS, 2011; PhD, 2016]).

SAFS grads standing in the snow at Table Mountain
One of many trips to the Table Mountain A-frame with SAFS grads Joe Anderson, Eric Ward, Keith Denton, Kristin Marshall, and friends.

Besides a well-respected degree and a professional network, SAFS gave me an amazing and supportive group of friends. I’d like to think there was something special about SAFS from 2003 to 2007. I formed quick and lasting bonds with many SAFS grad students (including my now husband). We struggled through homework together, went hiking and skiing together, got jobs near and far, and now are raising families (e.g., Kristi Straus [PhD, 2010], Donna Hauser [BS, 2002; MS, 2006; PhD, 2016], Peter Westley [BS, 2004; MS, 2007], Joe Anderson [MS, 2006], Keith Denton [MS, 2008], Bridget Ferris [PhD, 2011], Chris Kenaley [PhD, 2010]).  I’m particularly grateful to my female SAFS friends, who navigated similar transitions from graduate student to post-doc to permanent positions, and could identify with my experiences as a woman in science, balancing work and life and spouses and parents and kids at different times and sometimes all at the same time. These friendships go beyond fisheries, but they began at SAFS.  My holiday card mailing list seems to grow every year, but there are still at least as many SAFS-family as people I share actual DNA with on that list.

I am extremely grateful for the tangible and intangible benefits of my time at SAFS. And as the school moves into a second century, I hope I’m able to give back to the current and future generations of the SAFS community even a fraction of what it’s given me.


Centennial Story 36: Kelli Johnson (PhD, 2018)

As a native of the Olympic Peninsula, I grew up thinking everyone had access to fresh oysters in the half shell, spotted shrimp straight from the bay, and mountain peaks minutes from their house. Every day I did something outside that involved animals, mostly feeding domestic ones and harvesting wild ones. Sometimes, my sister and I would ask our teachers for extra-credit assignments so we would be too busy to feed the horses and cows; schoolwork was the only excuse that would work on our mom. The choice to go to college was simple. If I was in school or working on the farm, my parents would foot the bill for my horse addiction and going to school seemed easier than working on the farm. The harder choice was deciding what I wanted to go to school for. I knew it had to involve animals and the outdoors, but I did not want to be a farmer and I did not think I was smart enough to be a veterinarian. Consequently, I thought my options were being a zookeeper or game warden.

My first fishing trip to Alaska. Pictured with my dad and a salmon he landed while on our friends boat, "The Salmon Spirit". 
My first fishing trip to Alaska. Pictured with my dad and a salmon he landed while on our friends boat, “The Salmon Spirit”.

While attending the University of Puget Sound in Tacoma, I quickly found that I loved biology. I particularly enjoyed learning about population dynamics because I could relate it to the hunting and fishing regulations I grew up attempting to skirt around. The classes were hard at first because I did not take biology in high school, but I enjoyed it so much that I did not mind the challenge. More importantly, I learned that biologists could work outside. Eventually, I landed an internship, and then a job, at Cascadia Research Collective, a non-profit marine mammal research group in Olympia. Soon, I learned that I needed more quantitative skills to analyze the data we were collecting.

Upon finishing my MS in resource and environmental management at Simon Fraser University under Andrew Cooper (PhD QERM, 2000), I still felt I needed more skills. I set my sights on SAFS. I believed UW was the best university for teaching quantitative skills in an applied sense, and it was within a commutable distance from my family. Immediately, I gained a profound amount of respect for André Punt’s ability to teach quantitative concepts to people without mathematical backgrounds and for the approachability of the SAFS faculty in general. Initially, I found it difficult to ask for help from other students, but the benefits were immediate and substantial once I found the courage. By my second year, I was learning more from working on side projects with my peers than attending organized classes. Soon everyone was trying to teach me how to say “No” to new projects (AEP: she never really managed to learn that).

A side project that involved searching for puffins in the Gulf of Alaska with John Piatt (SAFS affiliate faculty). 
A side project that involved searching for puffins in the Gulf of Alaska with John Piatt (SAFS affiliate faculty).

Graduate school can be rough, but I honestly feel that even if I do not do anything related to my PhD ever again, attending SAFS was worth it. Many communities operate similarly to Ricky Bobby’s philosophy that “if you ain’t first, you’re last.” Fortunately, SAFS does not. Instead, SAFS thrives through the sum of its parts. Once I accepted that everyone there—past, present, and future—knew more than me about something, I began to grow as a researcher. The collective knowledge of the SAFS community is like a never-ending resource. SAFS taught me how to learn; you ask around, you pick up a book, you ask around again. I am genuinely excited that now as a biologist at the Northwest Fisheries Science Center I still feel like I am a part of the SAFS community. Maybe one day, I too can lure a graduate student away from their dissertation to work on a side project that helps them learn how to learn.


The Behavior and Ecology of Pacific Salmon and Trout, Second Edition is Now Available

In 2005, University of Washington School of Aquatics and Fishery Science professor Thomas Quinn released his book, The Behavior and Ecology of Pacific Salmon and Trout, to fill what he saw to be a void between the highly technical and detailed scientific literature and engaging coffee table books with beautiful photos — but little scientific content. Discussing the basic behavior and ecology of these incredible fishes, his writing conveyed the importance of salmon and trout to both the people and the natural world along the Pacific Rim.

Tom Quinn with Sockeye Salmon
Professor Thomas Quinn holding a sockeye salmon in Alaska

“The book was designed to be technically accurate with tables and references, but also jargon-free and approachable to all readers, with original artwork and photos. I was pleased that it appealed to a wide range of readers from scientists and students to agency staff, anglers, conservationists, and members of the general public,” says Quinn.

The updated version, contains brand new photos and information about the life cycles of these marvelous fish in freshwater and marine environments.

“I hope the second edition informs readers and inspires them to value salmon and trout and work for their conservation.”

You can purchase your copy of The Behavior and Ecology of Pacific Salmon and Trout here.

The Behavior and Ecology of Pacific Salmon and Trout
The Behavior and Ecology of Pacific Salmon and Trout, second edition

Boots in the Mud: A Summer with the Alaska Salmon Program

Peering out the window, Melinda Carr watched as her plane descended, breaking through the thick blanket of clouds.

“Woah,” she said softly, as a vast mountain range revealed itself, expanding far off into the horizon.

The tallest peaks were crowned in ice and snow while the smaller ones were barren, exposing the jagged the rock underneath. Further down the slopes, tall pines covered the sides in a lush green while long, winding rivers carved valleys in the wild landscape on their way out to the sea.

“First time here?” the woman seated next to her asked excitedly.

“Yeah,” Melinda answered.

“Well, welcome to Alaska!” she said with a smile.

Melinda is part of a group of undergraduate students taking a one-of-a-kind course through the University of Washington’s School of Aquatic and Fishery Sciences (SAFS). Students fly 1,777 miles northwest of Seattle and spend a month with the Alaska Salmon Program at their field stations on the banks of Lake Aleknagik and Lake Nerka. Part of the larger Wood River system, these lakes, their creeks, and the surrounding wilderness serve as a “living laboratory” where students are immersed in one of the most valuable salmon fisheries on the planet. The yearly sockeye salmon runs here are the driving life force for the plants, animals, and people of the region while also sustaining over half of the world’s sockeye catch.

Five students hike across tundra on their way back to camp in Alaska
The class hikes across the tundra on their way back to camp

Every morning, the class of eight students suit up in chest-high waders and water-proof boots, clip on a holster of bear-spray, and take a couple small skiffs out into the wilderness. The day’s fieldwork varies, but often consists of trudging up one of the many meandering creeks to survey thousands of bright-red sockeye salmon returning home to spawn.

The course is taught by SAFS professors Thomas Quinn, Daniel Schindler, and Ray Hilborn – three of the preeminent salmon researchers in the world – with each faculty member covering different topics to provide the class with a comprehensive picture of the salmon fishery in Bristol Bay. Along with the professors, the students work closely with graduate students conducting their own research, Alaska Salmon Program staff (including experienced scientists Jackie Carter and Chris Boatright), and visiting researchers from around the world. Over the summer, students learn about the spawning behavior and life history of adult salmon, the surrounding ecosystems, population dynamics, and fishery management all while developing the necessary skills to ask and answer their own scientific questions.

“You can sit and have a lecture anywhere, but you can’t go see salmon spawning in a stream anytime,” says Liz Landefeld, a sophomore with the School of Environmental and Forest Sciences. “All of the professors for the program were excited for people to see what they have been lecturing about for months.”

For the students, every day is an opportunity to learn and experience something new, building on the previous day’s lessons and honing skills that will help them in their developing careers.  It is also a chance for many of them to see how data they have previously worked with back in Seattle is collected in the field for the first time.

“It’s a really comfortable and open learning environment. If you don’t know how to do something or don’t know something, everyone wants you to know that thing.”

Liz Landefeld

Andrea Odell is a SAFS senior who has worked extensively with data collected in Alaska for her capstone project. For her research she is examining the genetic diversity between sockeye salmon on different creeks at Lake Nerka.

“I’ve done my whole capstone working on A and C Creeks and it’s interesting to see by the data how the population works, but it’s even more interesting to actually come out here and look at it,” she says. “I think it’s a good way to cap off my senior year.”

 

Explore the interactive map below to read stories and experiences from the students.

 

 

To learn more about the Alaska Salmon Program or how to apply, please visit their website at http://depts.washington.edu/aksalmon/ and contact your advisor.

In April 2019, the School of Aquatic and Fishery Sciences will celebrate its 100th year. To commemorate the Centennial, SAFS has created a new endowment called the Centennial Boots in the Mud Fund that will support experiences like these for students to get out in the field. To encourage support for this effort, the School will match all gifts up to $100,000. Visit http://www.uw.edu/giving/bootsinthemud to learn more. For questions, contact Gerald Cournoyer at 206-221-0562 or gcourn@uw.edu.


Kupe and the Corals: bringing science to life for kids

(This story originally appeared on the UW College of the Environment website, August 15, 2018)

As a burgeoning marine biologist, Jackie Padilla-Gamiño found herself on the shores of Moorea, one of the best places in the world to study corals. The South Pacific island’s healthy reefs, shimmering clear waters, and pristine ecosystems set the stage for the newly minted Dr. Padilla-Gamiño to immerse herself in coral reef ecology.

She quickly realized others were interested in her research, too. While preparing over 100 coral fragments for an experiment along the shoreline, the local kids — who had been playing in the island’s salty lagoon nearby — became intrigued by Padilla-Gamiño’s work. They gathered closer to get a peek and ask questions.

Padilla-Gamiño and teachers attending a coral reef workshop in Hawaii.
Padilla-Gamiño and teachers attending a coral reef workshop in Hawaii.

“They were very curious and spoke French and Tahitian,” says Padilla-Gamiño. “In my broken French and English, I tried to tell them what I was doing.”

Padilla-Gamiño immediately saw herself in the kids. She grew up in Mexico and recalls seeing foreign scientists doing research in the field there. They appeared to be doing something interesting, she says, but would soon disappear back to their own home countries.

“You never knew what they were up to. And even if they published their data, as a kid that’s not something I had access to or would even understand.”

That experience drove Padilla-Gamiño, an assistant professor at the University of Washington’s School of Aquatic and Fishery Sciences, to think of ways to connect her research to those curious kids. Thoughts of a children’s book took hold, and the idea for “Kupe and the Corals” was born. Two years later the book was published.

Kupe and the Corals” tells the story of a young boy who undertakes a journey of discovery, learning about the vast and diverse corals right in his backyard. While out on the reef one night with his father, he observes thousands tiny pink “bubbles” in the water. Curiosity leads him to a village elder and a scientist to talk about what he saw, where he learns how important corals are to the animals inhabiting the reef and to the people who live on the island.

“I wanted to leave something behind to share with these kids. That’s why for me, it was important to have it be translated into Tahitian,” says Padilla-Gamiño.

But Padilla-Gamiño wanted to reach even more kids. Beyond Tahitian, “Kupe and the Corals” has been translated into Paumotu, a Polynesian language spoken by people in the Tuamotu archipelago, as well as French, Spanish and English — five languages in all.

Padilla-Gamiño prepares coral fragments for experimentation in Moorea.
Padilla-Gamiño prepares coral fragments for experimentation in Moorea.

Initially, not all of Padilla-Gamiño’s colleageus were supportive of her efforts to write a children’s book, especially as a young scientist who was trying to establish her career. At first, this feedback made her second-guess her own priorities. But in the end, she chose to move forward and write the book.

“I remember thinking, ‘What? No, this is the time. We cannot wait to communicate.’ Maybe the kids I saw will have access to this book, and maybe we can generate change earlier. I don’t want to wait for the next generation, I want it to be this generation.”

“Kupe and the Corals” was published as part of the National Science Foundation’s Long Term Ecological Research program in their Schoolyard Series.


Thomas Quinn Releases Second Edition of Heralded Book, The Behavior and Ecology of Pacific Salmon and Trout

In 2005, University of Washington School of Aquatics and Fishery Science professor Thomas Quinn released his book, The Behavior and Ecology of Pacific Salmon and Trout, to fill what he saw to be a void between the highly technical and detailed scientific literature and engaging coffee table books with beautiful photos — but little scientific content. Discussing the basic behavior and ecology of these incredible fishes, his writing conveyed the importance of salmon and trout to both the people and the natural world along the Pacific Rim.

Tom Quinn with Sockeye Salmon
Professor Thomas Quinn holding a sockeye salmon in Alaska

“The book was designed to be technically accurate with tables and references, but also jargon-free and approachable to all readers, with original artwork and photos. I was pleased that it appealed to a wide range of readers from scientists and students to agency staff, anglers, conservationists, and members of the general public,” says Quinn.

The updated version, contains brand new photos and information about the life cycles of these marvelous fish in freshwater and marine environments.

“I hope the second edition informs readers and inspires them to value salmon and trout and work for their conservation.”

The Behavior and Ecology of Pacific Salmon and Trout
The Behavior and Ecology of Pacific Salmon and Trout, second edition