Almost 25 years ago, an undergraduate took the SAFS “Aquatic Ecological Research in Alaska (AERA)” summer field class, as part of the Alaska Salmon Program (ASP). Always interested in marine mammals, Donna Hauser, a biology student who ended up double majoring in Biology and Aquatic and Fishery Sciences, started a study of the resident harbor seals in Iliamna Lake for her independent research project. Alaska’s largest lake and 7th largest in the US, students from the University of Washington have been conducting research on Iliamna Lake since the early 1960s, and these harbor seals are well-known to people living around the lake, but formal research on the seals was very limited prior to Donna’s work.

Combined with data collected by a subsequent student in the class, Donna published her findings in the Aquatic Mammals scientific journal in 2008, looking into the summer diet and consumption patterns of Iliamna Lake’s resident harbor seals. Going on to complete her MS and PhD at SAFS on killer whales and belugas, respectively, Donna is now a Research Associate Professor working for the University of Alaska Fairbanks. “Interest in these seals increased and after sampling for genetic tissue by Donna and others, a new paper has now been published by Biology Letters”, shared Tom Quinn, SAFS Professor and advisor to Donna for her undergraduate project at SAFS. “The essence of the paper is that these seals, which are easily capable of swimming to and from Bristol Bay and thus integrating with seals there, are highly different from them genetically.”

In comparison with other harbor seals, it has been revealed that there is more genetic similarity between harbor seals along their whole Pacific Rim range (e.g., based on samples from California to Japan, including Bristol Bay) than there is between Bristol Bay and Iliamna Lake. “This is a very cool discovery. While geneticists have done the bulk of the work to show how genetically different these seals are from other harbor seals, it was Donna’s opening, back in 2001, that got us thinking about them,” Tom said.

Fast forward to 2012, when another undergraduate, Brian Harmon, headed up to Iliamna Lake for the same AERA class. “Brian’s serendipitous observation of parasites in sculpins initiated a study on the genetic status of the parasites, in comparison to the similar ones commonly seen in 3-spine and 9-spine sticklebacks”, Tom shared. Sticklebacks are a family of ray-finned fishes, and are found in freshwater, brackish, and marine environments and consume zooplankton, including copepods which are the source of infection. Sculpins are a primarily benthic species and generally do not appear to consume copepods in these environments, leading researchers to wonder what the mechanism is for widespread infection by the parasites.
- Slimy sculpin with the cestode parasite that it contained. (Credit: Tom Quinn)
- Three-spine stickleback with the distended belly typical of cestode parasite infection. (Credit: Tom Quinn)
“The study was expanded from Iliamna Lake to Lake Aleknagik, another Alaska Salmon Program site, and included parasites from two sculpin species as well as both stickleback species, and involved collaboration with parasitologists and geneticists,” Tom said. “This study, recently published in Parasitology in May 2024, shows that the parasites in the sculpins are highly different from those in the sticklebacks, and probably should be a distinct species”. After obtaining his BS in 2012, Brian completed his MS in Natural Resource Sciences at the University of Nebraska in 2017, and now works in the sustainability space as a Principal Technical Advisor for LMI.

The so-called “cryptic diversity” of both these species – Iliamna’s harbor seals and parasites found in fish in Alaska’s lakes – means that although they are superficially similar, their genetics are very different. “I credit the terrific opportunities of the AERA class and the creativity and hard work by these two students for a couple of major discoveries,” Tom said. “I am very proud of both Donna and Brian, for their insights and eagerness to see the projects through, and the wonderful collaborators inside and outside of the University of Washington, without whom these projects would have died on the vine.”
- AERA Class in 2001
- AERA Class in 2012